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ChemAxon LLC screenmd command line script within jchem
Screenmd Command Line Script Within Jchem, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/screenmd+command+line+script+within+jchem/screenmd+command+line+script+within+jchem/10__1021_slash_acs__jmedchem__8b01855-61-91-93
Average 90 stars, based on 1 article reviews
screenmd command line script within jchem - by Bioz Stars, 2026-09
90/100 stars

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Article Title: Fragment Hits: What do They Look Like and How do They Bind?
Article Snippet: .. The dissimilarity distribution of fragments was evaluated using extended connectivity fingerprints (ECFP4)31 with Page 6 of 52 ACS Paragon Plus Environment Journal of Medicinal Chemistry 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 6 the screenmd command line script within JChem from ChemAxon.28 Octanol-water partition coefficient (clogP) values for the fragments were calculated using the classic algorithm within the batch version of ACD/Percepta.32,33 The number and identity of ring assemblies, BemisMurcko frameworks, and the fraction of sp3-hybridized carbon atoms (Fsp3) were calculated using Vortex.34 Protein-pocket descriptors were computed using default parameters in dpocket, and implemented as part of the α spheres–based methodology available in fpocket.35 Here, selection of the relevant fragment hit was used to explicitly define the associated binding pocket. ..

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Article Title: Fragment Hits: What do They Look Like and How do They Bind?
Article Snippet: .. The dissimilarity distribution of fragments was evaluated using extended connectivity fingerprints (ECFP4)31 with Page 6 of 52 ACS Paragon Plus Environment Journal of Medicinal Chemistry 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 6 the screenmd command line script within JChem from ChemAxon.28 Octanol-water partition coefficient (clogP) values for the fragments were calculated using the classic algorithm within the batch version of ACD/Percepta.32,33 The number and identity of ring assemblies, BemisMurcko frameworks, and the fraction of sp3-hybridized carbon atoms (Fsp3) were calculated using Vortex.34 Protein-pocket descriptors were computed using default parameters in dpocket, and implemented as part of the α spheres–based methodology available in fpocket.35 Here, selection of the relevant fragment hit was used to explicitly define the associated binding pocket. ..



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ChemAxon LLC screenmd command line script within jchem
Screenmd Command Line Script Within Jchem, supplied by ChemAxon LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/screenmd+command+line+script+within+jchem/screenmd+command+line+script+within+jchem/10__1021_slash_acs__jmedchem__8b01855-61-91-93
Average 90 stars, based on 1 article reviews
screenmd command line script within jchem - by Bioz Stars, 2026-09
90/100 stars
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